Gene: A4GNT

  • Entrez Gene ID

  • Symbol

    • A4GNT

  • Synonyms

    • alpha4GnT

  • Description

    • alpha-1,4-N-acetylglucosaminyltransferase

  • Type of Gene

    • protein-coding

  • Chromosome

    • 3

  • Location

    • 3p14.3

  • RNA Seq 1

    Sample Expression RPKM
    adipose
    		0.02
    colon
    		0
    heart
    		0
    hypothalamus
    		0
    kidney
    		0.16
    liver
    		0.02
    lung
    		0.03
    ovary
    		0.08
    skeletalmuscle
    		0
    spleen
    		0
    testes
    		0

  • Protein

    Tissue Cell type Staining level Reliability
    adrenal gland glandular cells Moderate Supportive
    appendix glandular cells Negative Supportive
    appendix lymphoid tissue Negative Supportive
    bone marrow hematopoietic cells Weak Supportive
    breast glandular cells Weak Supportive
    bronchus respiratory epithelial cells Negative Supportive
    cerebellum cells in granular layer Weak Supportive
    cerebellum cells in molecular layer Weak Supportive
    cerebellum Purkinje cells Strong Supportive
    cerebral cortex glial cells Negative Supportive
    cerebral cortex neuronal cells Moderate Supportive
    cervix, uterine glandular cells Negative Supportive
    cervix, uterine squamous epithelial cells Negative Supportive
    colon glandular cells Moderate Supportive
    duodenum glandular cells Moderate Supportive
    epididymis glandular cells Negative Supportive
    esophagus squamous epithelial cells Weak Supportive
    fallopian tube glandular cells Weak Supportive
    gall bladder glandular cells Weak Supportive
    heart muscle myocytes Negative Supportive
    hippocampus glial cells Negative Supportive
    hippocampus neuronal cells Moderate Supportive
    kidney cells in glomeruli Moderate Supportive
    kidney cells in tubules Negative Supportive
    lateral ventricle glial cells Negative Supportive
    lateral ventricle neuronal cells Moderate Supportive
    liver bile duct cells Negative Supportive
    liver hepatocytes Strong Supportive
    lung macrophages Weak Supportive
    lung pneumocytes Negative Supportive
    lymph node germinal center cells Negative Supportive
    lymph node non-germinal center cells Negative Supportive
    nasopharynx respiratory epithelial cells Negative Supportive
    oral mucosa squamous epithelial cells Weak Supportive
    ovary follicle cells Negative Supportive
    ovary ovarian stroma cells Negative Supportive
    pancreas exocrine glandular cells Weak Supportive
    pancreas islets of Langerhans Moderate Supportive
    parathyroid gland glandular cells Negative Supportive
    placenta decidual cells Weak Supportive
    placenta trophoblastic cells Weak Supportive
    prostate glandular cells Moderate Supportive
    rectum glandular cells Weak Supportive
    salivary gland glandular cells Negative Supportive
    seminal vesicle glandular cells Negative Supportive
    skeletal muscle myocytes Negative Supportive
    skin epidermal cells Weak Supportive
    small intestine glandular cells Negative Supportive
    smooth muscle smooth muscle cells Weak Supportive
    spleen cells in red pulp Negative Supportive
    spleen cells in white pulp Negative Supportive
    stomach, lower glandular cells Moderate Supportive
    stomach, upper glandular cells Strong Supportive
    testis cells in seminiferus ducts Moderate Supportive
    testis Leydig cells Weak Supportive
    thyroid gland glandular cells Weak Supportive
    tonsil germinal center cells Negative Supportive
    tonsil non-germinal center cells Negative Supportive
    tonsil squamous epithelial cells Moderate Supportive
    urinary bladder urothelial cells Weak Supportive
    uterus, post-menopause cells in endometrial stroma Negative Supportive
    uterus, post-menopause glandular cells Weak Supportive
    uterus, pre-menopause cells in endometrial stroma Negative Supportive
    uterus, pre-menopause glandular cells Negative Supportive
    vagina squamous epithelial cells Weak Supportive
    vulva/anal skin epidermal cells Negative Supportive

  • Gene Ontology

    GO ID GO term PubMed Category
    GO:0000139 Golgi membrane Component
    GO:0005795 Golgi stack Component
    GO:0016021 integral to membrane Component
    GO:0016020 membrane 10430883 Component
    GO:0008375 acetylglucosaminyltransferase activity 10430883 Function
    GO:0008378 galactosyltransferase activity Function
    GO:0005975 carbohydrate metabolic process 10430883 Process
    GO:0009101 glycoprotein biosynthetic process 10430883 Process
    GO:0006493 protein O-linked glycosylation 10430883 Process
  1. Krupp M et al. (2012) RNA-Seq Atlas - a reference database for gene expression profiling in normal tissue by next-generation sequencing. Bioinformatics, 28, 1184-1185. doi:10.1093/bioinformatics/bts084