Gene: BRIX1

  • Entrez Gene ID

  • Symbol

    • BRIX1
  • Synonyms

    • BRIX, BXDC2
  • Description

    • BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
  • Type of Gene

    • protein-coding
  • Chromosome

    • 5
  • Location

    • 5p13.2
  • RNA Seq 1

    Sample Expression RPKM
    adipose
    3.37
    colon
    2.2
    heart
    4.68
    hypothalamus
    6.22
    kidney
    4.61
    liver
    4.26
    lung
    3.04
    ovary
    3.02
    skeletalmuscle
    2.51
    spleen
    6.28
    testes
    6.13
  • Protein

    Tissue Cell type Staining level Reliability
    adrenal gland glandular cells Negative Uncertain
    appendix glandular cells Moderate Uncertain
    appendix lymphoid tissue Weak Uncertain
    bone marrow hematopoietic cells Strong Uncertain
    breast glandular cells Moderate Uncertain
    bronchus respiratory epithelial cells Strong Uncertain
    cerebellum cells in granular layer Negative Uncertain
    cerebellum cells in molecular layer Negative Uncertain
    cerebellum Purkinje cells Moderate Uncertain
    cerebral cortex glial cells Weak Uncertain
    cerebral cortex neuronal cells Moderate Uncertain
    cervix, uterine glandular cells Strong Uncertain
    cervix, uterine squamous epithelial cells Strong Uncertain
    colon glandular cells Moderate Uncertain
    duodenum glandular cells Strong Uncertain
    epididymis glandular cells Moderate Uncertain
    esophagus squamous epithelial cells Moderate Uncertain
    fallopian tube glandular cells Strong Uncertain
    gall bladder glandular cells Moderate Uncertain
    heart muscle myocytes Moderate Uncertain
    hippocampus glial cells Negative Uncertain
    hippocampus neuronal cells Moderate Uncertain
    kidney cells in glomeruli Moderate Uncertain
    kidney cells in tubules Strong Uncertain
    lateral ventricle glial cells Negative Uncertain
    lateral ventricle neuronal cells Moderate Uncertain
    liver bile duct cells Negative Uncertain
    liver hepatocytes Negative Uncertain
    lung macrophages Negative Uncertain
    lung pneumocytes Moderate Uncertain
    lymph node germinal center cells Negative Uncertain
    lymph node non-germinal center cells Moderate Uncertain
    nasopharynx respiratory epithelial cells Strong Uncertain
    oral mucosa squamous epithelial cells Strong Uncertain
    ovary follicle cells Negative Uncertain
    ovary ovarian stroma cells Negative Uncertain
    pancreas exocrine glandular cells Moderate Uncertain
    pancreas islets of Langerhans Negative Uncertain
    parathyroid gland glandular cells Negative Uncertain
    placenta trophoblastic cells Weak Uncertain
    prostate glandular cells Negative Uncertain
    rectum glandular cells Strong Uncertain
    salivary gland glandular cells Strong Uncertain
    seminal vesicle glandular cells Moderate Uncertain
    skeletal muscle myocytes Strong Uncertain
    skin epidermal cells Strong Uncertain
    small intestine glandular cells Moderate Uncertain
    smooth muscle smooth muscle cells Negative Uncertain
    spleen cells in red pulp Strong Uncertain
    spleen cells in white pulp Weak Uncertain
    stomach, lower glandular cells Moderate Uncertain
    stomach, upper glandular cells Strong Uncertain
    testis cells in seminiferus ducts Weak Uncertain
    testis Leydig cells Weak Uncertain
    thyroid gland glandular cells Moderate Uncertain
    tonsil germinal center cells Weak Uncertain
    tonsil non-germinal center cells Negative Uncertain
    tonsil squamous epithelial cells Strong Uncertain
    urinary bladder urothelial cells Strong Uncertain
    uterus, post-menopause cells in endometrial stroma Negative Uncertain
    uterus, post-menopause glandular cells Weak Uncertain
    uterus, pre-menopause cells in endometrial stroma Negative Uncertain
    uterus, pre-menopause glandular cells Weak Uncertain
    vagina squamous epithelial cells Strong Uncertain
    vulva/anal skin epidermal cells Strong Uncertain
  • Gene Ontology

    GO ID GO term PubMed Category
    GO:0005730 nucleolus 18029348 Component
    GO:0005634 nucleus 18029348 Component
    GO:0003674 molecular_function Function
    GO:0042254 ribosome biogenesis Process
  1. Krupp M et al. (2012) RNA-Seq Atlas - a reference database for gene expression profiling in normal tissue by next-generation sequencing. Bioinformatics, 28, 1184-1185. doi:10.1093/bioinformatics/bts084