Gene: CD9

  • Entrez Gene ID

  • Symbol

    • CD9
  • Synonyms

    • BTCC-1, DRAP-27, MIC3, MRP-1, TSPAN-29, TSPAN29
  • Description

    • CD9 molecule
  • Type of Gene

    • protein-coding
  • Chromosome

    • 12
  • Location

    • 12p13.3
  • RNA Seq 1

    Sample Expression RPKM
    adipose
    23.27
    colon
    40.55
    heart
    21.32
    hypothalamus
    28.78
    kidney
    28.74
    liver
    14.91
    lung
    43.8
    ovary
    7.51
    skeletalmuscle
    7.62
    spleen
    21.04
    testes
    12.87
  • Protein

    Tissue Cell type Staining level Reliability
    adrenal gland glandular cells Moderate Supportive
    appendix glandular cells Moderate Supportive
    appendix lymphoid tissue Weak Supportive
    bronchus respiratory epithelial cells Moderate Supportive
    cerebellum cells in granular layer Negative Supportive
    cerebellum cells in molecular layer Negative Supportive
    cerebellum Purkinje cells Negative Supportive
    cerebral cortex glial cells Moderate Supportive
    cerebral cortex neuronal cells Moderate Supportive
    cervix, uterine glandular cells Moderate Supportive
    cervix, uterine squamous epithelial cells Strong Supportive
    colon glandular cells Strong Supportive
    duodenum glandular cells Weak Supportive
    epididymis glandular cells Moderate Supportive
    esophagus squamous epithelial cells Moderate Supportive
    fallopian tube glandular cells Strong Supportive
    gall bladder glandular cells Negative Supportive
    heart muscle myocytes Negative Supportive
    hippocampus glial cells Negative Supportive
    hippocampus neuronal cells Strong Supportive
    kidney cells in glomeruli Moderate Supportive
    kidney cells in tubules Strong Supportive
    lateral ventricle glial cells Negative Supportive
    lateral ventricle neuronal cells Strong Supportive
    liver bile duct cells Negative Supportive
    liver hepatocytes Negative Supportive
    lung macrophages Strong Supportive
    lung pneumocytes Strong Supportive
    lymph node germinal center cells Negative Supportive
    lymph node non-germinal center cells Negative Supportive
    nasopharynx respiratory epithelial cells Strong Supportive
    oral mucosa squamous epithelial cells Strong Supportive
    ovary follicle cells Moderate Supportive
    ovary ovarian stroma cells Negative Supportive
    pancreas exocrine glandular cells Moderate Supportive
    pancreas islets of Langerhans Moderate Supportive
    parathyroid gland glandular cells Strong Supportive
    placenta trophoblastic cells Negative Supportive
    prostate glandular cells Strong Supportive
    rectum glandular cells Strong Supportive
    salivary gland glandular cells Strong Supportive
    seminal vesicle glandular cells Strong Supportive
    skeletal muscle myocytes Negative Supportive
    skin epidermal cells Strong Supportive
    small intestine glandular cells Strong Supportive
    smooth muscle smooth muscle cells Moderate Supportive
    spleen cells in red pulp Moderate Supportive
    spleen cells in white pulp Weak Supportive
    stomach, lower glandular cells Weak Supportive
    stomach, upper glandular cells Moderate Supportive
    testis cells in seminiferus ducts Moderate Supportive
    testis Leydig cells Moderate Supportive
    thyroid gland glandular cells Moderate Supportive
    tonsil germinal center cells Weak Supportive
    tonsil non-germinal center cells Negative Supportive
    urinary bladder urothelial cells Strong Supportive
    uterus, post-menopause cells in endometrial stroma Negative Supportive
    uterus, post-menopause glandular cells Weak Supportive
    uterus, pre-menopause cells in endometrial stroma Negative Supportive
    uterus, pre-menopause glandular cells Moderate Supportive
    vagina squamous epithelial cells Strong Supportive
    vulva/anal skin epidermal cells Moderate Supportive
  • Gene Ontology

    GO ID GO term PubMed Category
    GO:0016324 apical plasma membrane Component
    GO:0009897 external side of plasma membrane Component
    GO:0005887 integral to plasma membrane 2037603 Component
    GO:0005886 plasma membrane Component
    GO:0031092 platelet alpha granule membrane Component
    GO:0005178 integrin binding Function
    GO:0005515 protein binding 11278880 Function
    GO:0007596 blood coagulation Process
    GO:0007420 brain development Process
    GO:0007155 cell adhesion 7511626 Process
    GO:0006928 cellular component movement 8478605 Process
    GO:0007342 fusion of sperm to egg plasma membrane 14575715 Process
    GO:0008285 negative regulation of cell proliferation Process
    GO:0014003 oligodendrocyte development Process
    GO:0030913 paranodal junction assembly Process
    GO:0030168 platelet activation 2037603 Process
    GO:0030168 platelet activation Process
    GO:0002576 platelet degranulation Process
    GO:0009414 response to water deprivation Process
  1. Krupp M et al. (2012) RNA-Seq Atlas - a reference database for gene expression profiling in normal tissue by next-generation sequencing. Bioinformatics, 28, 1184-1185. doi:10.1093/bioinformatics/bts084