CellFinder · Gene

Gene: CDH1

Entrez Gene ID
- 999 (Go to NCBI)
Symbol
- CDH1
Synonyms
- Arc-1, CD324, CDHE, ECAD, LCAM, UVO
Description
- cadherin 1, type 1, E-cadherin (epithelial)
Type of Gene
- protein-coding
Chromosome
- 16
Location
- 16q22.1

RNA Seq ¹

Sample	Expression	RPKM
adipose		0
colon		11.84
heart		0.01
hypothalamus		0.5
kidney		7.24
liver		8.33
lung		4.57
ovary		0.37
skeletalmuscle		0.04
spleen		1.44
testes		1.09

Gene Ontology

GO ID	GO term	PubMed	Category
GO:0015629	actin cytoskeleton	16338932	Component
GO:0016235	aggresome	18029348	Component
GO:0043296	apical junction complex	10460003	Component
GO:0045177	apical part of cell		Component
GO:0016342	catenin complex	18593713	Component
GO:0030054	cell junction	19038973	Component
GO:0030054	cell junction	17047063	Component
GO:0009986	cell surface		Component
GO:0005913	cell-cell adherens junction	16338932	Component
GO:0005737	cytoplasm	18029348	Component
GO:0005768	endosome		Component
GO:0005925	focal adhesion	18029348	Component
GO:0005794	Golgi apparatus		Component
GO:0016021	integral to membrane	16338932	Component
GO:0009898	internal side of plasma membrane		Component
GO:0043219	lateral loop		Component
GO:0016328	lateral plasma membrane	16338932	Component
GO:0033268	node of Ranvier		Component
GO:0048471	perinuclear region of cytoplasm	16338932	Component
GO:0005886	plasma membrane	18029348	Component
GO:0005886	plasma membrane		Component
GO:0043220	Schmidt-Lanterman incisure		Component
GO:0005802	trans-Golgi network	17620337	Component
GO:0030506	ankyrin binding	17620337	Function
GO:0008013	beta-catenin binding	17620337	Function
GO:0005509	calcium ion binding		Function
GO:0050839	cell adhesion molecule binding	16338932	Function
GO:0045295	gamma-catenin binding	1639850	Function
GO:0032794	GTPase activating protein binding		Function
GO:0005515	protein binding	11401320	Function
GO:0019904	protein domain specific binding		Function
GO:0019903	protein phosphatase binding		Function
GO:0034332	adherens junction organization		Process
GO:0006915	apoptotic process		Process
GO:0034329	cell junction assembly		Process
GO:0016337	cell-cell adhesion	16338932	Process
GO:0045216	cell-cell junction organization		Process
GO:0006921	cellular component disassembly involved in execution phase of apoptosis		Process
GO:0071230	cellular response to amino acid stimulus		Process
GO:0071681	cellular response to indole-3-methanol	10868478	Process
GO:0071285	cellular response to lithium ion	12937339	Process
GO:0090102	cochlea development		Process
GO:0007156	homophilic cell adhesion	16338932	Process
GO:0022408	negative regulation of cell-cell adhesion	19653274	Process
GO:0031175	neuron projection development		Process
GO:0021983	pituitary gland development		Process
GO:0042993	positive regulation of transcription factor import into nucleus	16338932	Process
GO:0045893	positive regulation of transcription, DNA-dependent	16338932	Process
GO:0051260	protein homooligomerization		Process
GO:0072659	protein localization to plasma membrane	17620337	Process
GO:0019538	protein metabolic process		Process
GO:0060693	regulation of branching involved in salivary gland morphogenesis		Process
GO:0043281	regulation of cysteine-type endopeptidase activity involved in apoptotic process		Process
GO:0050776	regulation of immune response		Process
GO:2000008	regulation of protein localization to cell surface		Process
GO:0033561	regulation of water loss via skin		Process
GO:0042493	response to drug		Process
GO:0009636	response to toxin		Process
GO:0060662	salivary gland cavitation		Process
GO:0007605	sensory perception of sound		Process
GO:0007416	synapse assembly		Process
GO:0070830	tight junction assembly		Process
GO:0001829	trophectodermal cell differentiation		Process

Krupp M et al. (2012) RNA-Seq Atlas - a reference database for gene expression profiling in normal tissue by next-generation sequencing. Bioinformatics, 28, 1184-1185. doi:10.1093/bioinformatics/bts084

Gene: CDH1

Entrez Gene ID

Symbol

Synonyms

Description

Type of Gene

Chromosome

Location

RNA Seq 1

Gene Ontology

RNA Seq ¹